Cuscuta campestris Genome Assembly Data (version 0.1)

Data Usage Policy

As a public service, the Cuscuta campestris genome assembly and annoatations are being made available before scientific publication. These pre-publication data are preliminary and may contain errors. The goal of our policy is that early release should enable the progress of science. By accessing these data, you agree not to publish any articles containing analyses of genes or genomic data on a whole genome scale prior to publication by the our Genome Project and its collaborators of its comprehensive genome analysis. These restrictions will be lifted on the publication of the whole genome description of the assembly and draft annotation. Studies of any type on the reserved data sets that are not in direct competition with those planned by the Genome Project and its collaborators may also be undertaken following an agreement to that effect. Interested parties are encouraged to contact any of the Genome Project investigators, James Westwood (westwood@vt.edu), Claude dePamphilis(cwd3@psu.edu) or Michael Axtell (mja18@psu.edu) to discuss such possibilities.

Data Download

Cuscuta_campestris_v0.1.fasta.gz
Cuscuta_campestris_v0.1.allRepeats.lib.fasta.gz
Cuscuta_campestris_v0.1.repeatMasker.tbl.gz
Cuscuta_campestris_v0.1.hardmasked.fasta.gz
Cuscuta_campestris_v0.1.softmasked.fasta.gz
Cuscuta_campestris_v0.1.softmasked.fasta.gff2.gz
Cuscuta_campestris_v0.1.annotations.gff3.gz
Cuscuta_campestris_v0.1.annotations.mRNA.fasta.gz
Cuscuta_campestris_v0.1.annotations.cds.fasta.gz
Cuscuta_campestris_v0.1.annotations.filtered.cds.fasta.gz
Cuscuta_campestris_v0.1.annotations.filtered.primary.cds.fasta.gz
Cuscuta_campestris_v0.1.annotations.protein.fasta.gz
Cuscuta_campestris_v0.1.annotations.filtered.protein.fasta.gz
Cuscuta_campestris_v0.1.annotations.filtered.primary.proteins.fasta.gz
README

Cuscuta campestris HGT Manuscript Data

Cuscuta campestris HGT gene sequences, alignments, and phylogenies
Cuscuta species RNA-Seq datasets